PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_026069
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 548aa    MW: 60751 Da    PI: 6.9006
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_026069genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.4e-29225282359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  Dg++WrKYGqK  kg+++pr+YYrC+ + +Cpv+k+v+r+++d +++++tYeg+Hnh+
  DCAR_026069 225 DGCQWRKYGQKIAKGNPCPRAYYRCSVTpSCPVRKQVQRCSQDMSILITTYEGTHNHT 282
                  9*************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-30208284IPR003657WRKY domain
SuperFamilySSF1182907.59E-26216284IPR003657WRKY domain
PROSITE profilePS5081127.852218284IPR003657WRKY domain
SMARTSM007749.3E-35223283IPR003657WRKY domain
PfamPF031066.4E-26225281IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 548 aa     Download sequence    Send to blast
MEETLKRKAH GDAFKEEKRS ESSHADDEDR KDEDMPLVKD NELDSAKAEM HEVREENHRL  60
RTYLDKMMKD YQTLQTQFNN IVHDRDSPTK SRPVNDQGHR EQKHETRDEF DVSLSLGRSS  120
SSEIKRENDH KHSSSPKKPV EQDKEGLRLG LDCRFDVQPS VLSKEGVPES SPEHSLDDVK  180
EVGAETWNAQ KSEKAHEEDE VSHQNPAKKA RVSVRVRCDT PTMIDGCQWR KYGQKIAKGN  240
PCPRAYYRCS VTPSCPVRKQ VQRCSQDMSI LITTYEGTHN HTLPIAAHAM ASTTSAAAGM  300
LLSGSSTSGI GSSGAPTTIT TPAELHGLNY YLSNNSASSR PPFYLPNTSI SSSSSYPSIT  360
LDLTSSSSSM TSTFPPRYNL NSSSTNLNFN TSLDSNATLP IFWSNANNYQ LQNYAKNTQI  420
GQSLNFARQH QENLYPYSYM QKNNNDLAQA HQSMQMDKNS IESATKAITA DPNFQSALAA  480
AITSMIGSNN ISGNNVKLQE PSFPVLSSFL ATNSQASNMI RPLPPSLPIS SSKSKSTSPE  540
DNRDQVR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-19210284174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010256554.11e-134PREDICTED: probable WRKY transcription factor 72 isoform X1
RefseqXP_011071617.11e-134PREDICTED: probable WRKY transcription factor 72
TrEMBLA0A068VJ041e-127A0A068VJ04_COFCA; Uncharacterized protein
STRINGVIT_17s0000g05810.t011e-122(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19452464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-59WRKY DNA-binding protein 72